2023年度
- Different contributions of PROG1 and TAC1 to the angular kinematics of the main culm and tillers of wild rice (Oryza rufipogon)
Yoshiki Tokuyama, Miku Omachi, Shiori Kushida, Kiwamu Hikichi, Shuhei Okada, Kazumitsu Onishi, Takashige Ishii, Yuji Kishima, Yohei Koide
Planta 259(1) 19-19 - Genetics of chilling response at early growth stage in rice: a recessive gene for tolerance and importance of acclimation.
Akhil Ranjan Baruah, Hiroaki Bannai, Yan Meija, Ayumi Kimura, Haruka Ueno, Yohei Koide, Yuji Kishima, Jiwan Palta, Jun Kasuga, Masayuki P Yamamoto, Kazumitsu Onishi
AoB PLANTS 15(6) plad075 - Phylogenetic analysis of endogenous viral elements in the rice genome reveals local chromosomal evolution in Oryza AA-genome species.
Nozomi Saito, Sunlu Chen, Katsuya Kitajima, Zhitong Zhou, Yohei Koide, Jaymee R Encabo, Maria Genaleen Q Diaz, Il-Ryong Choi, Kanako O Koyanagi, Yuji Kishima
Frontiers in plant science 14 1261705-1261705 - いいね！やせいいね！
石川 亮, 山形 悦透, 小出 陽平, 石井 尊生, 石川 隆二, 秋本 正博, 津田 勝利, 藤田 大輔
育種学研究 advpub
2022年度
- Identification of a Saltol-Independent Salinity Tolerance Polymorphism in Rice Mekong Delta Landraces and Characterization of a Promising Line, Doc Phung.
Tam Thanh Nguyen, Maria Stefanie Dwiyanti, Shuntaro Sakaguchi, Yohei Koide, Dung Viet Le, Toshihiro Watanabe, Yuji Kishima
Rice (New York, N.Y.) 15(1) 65-65 - How to establish a mutually beneficial relationship between a transposon and its host: lessons from Tam3 in Antirrhinum.
Shasha Wang, Yohei Koide, Yuji Kishima
Genes & genetic systems 97(4) 177-184 - Lines for blast resistance genes with genetic background of Indica Group rice as international differential variety set
Yoshimichi Fukuta, Yohei Koide, Nobuya Kobayashi, Hiroshi Kato, Hiroki Saito, Mary Jeanie Telebanco‐Yanoria, Leodegario A. Ebron, Doris Mercado‐Escueta, Hiroshi Tsunematsu, Ikuo Ando, Daisuke Fujita, Mitsuhiro Obara, Asami Tomita, Nagao Hayashi, Tokio Imbe
Plant Breeding 141(5) 609-620 - Near-isogenic lines for resistance to blast disease, in the genetic background of the Indica Group rice (Oryza sativa L.) cultivar IR64
Yoshimichi Fukuta, Mary Jeanie Telebanco-Yanoria, Yohei Koide, Hiroki Saito, Nobuya Kobayashi, Mitsuhiro Obara, Seiji Yanagihara
Field Crops Research 282 108506-108506 - Characterization of QTLs for grain weight from New Plant Type rice cultivars through the development of near-isogenic lines with an IR 64 background
Daisuke Fujita, Analiza G. Tagle, Yohei Koide, Eliza V. Simon, Yoshimichi Fukuta, Tsutomu Ishimaru, Nobuya Kobayashi
Euphytica 218(5) - Seed management using NGS technology to rapidly eliminate a deleterious allele from rice breeder seeds
Elias G. Balimponya, Maria S. Dwiyanti, Toshiaki Ito, Shuntaro Sakaguchi, Koichi Yamamori, Yoshitaka Kanaoka, Yohei Koide, Yoshifumi Nagayoshi, Yuji Kishima
Breeding Science - Influence of Gender Bias on Distribution of Hybrid Sterility in Rice.
Zin Mar Myint, Yohei Koide
Frontiers in plant science 13 898206-898206 -
Editorial: Reproductive Barriers and Gene Introgression in Rice Species, Volume II.Frontiers in plant science 13 974613-974613
2021年度
- Genetic Mapping of the Gamete Eliminator Locus, S2, Causing Hybrid Sterility and Transmission Ratio Distortion Found between Oryza sativa and Oryza glaberrima Cross Combination
Myint Zin Mar, Yohei Koide, Mei Ogata, Daichi Kuniyoshi, Yoshiki Tokuyama, Kiwamu Hikichi, Mitsuhiro Obara, Yuji Kishima
Agriculture 11 (3), 268 - Revision of the relationship between anther morphology and pollen sterility by cold stress at the booting stage in rice
Koichi Yamamori, Kei Ogasawara, Seiya Ishiguro, Yohei Koide, Itsuro Takamure, Kaien Fujino, Yutaka Sato, Yuji Kishima
Annals of Botany, Volume 128, 559–575 - The mechanical origin of the radial shape in distichous phyllotaxy grass plants
Yoshiki Tokuyama, Yohei Koide, Kazumitsu Onishi, Kiwamu Hikichi, Miku Omachi, Itsuro Takamure, Yuji Kishima
in silico Plants, Volume 3, Issue 2, 2021, diab019
2020年度
- Fertile Tetraploids: New Resources for Future Rice Breeding?
Yohei Koide, Daichi Kuniyoshi, Yuji Kishima
FRONTIERS IN PLANT SCIENCE 11
DOI: 10.3389/fpls.2020.01231 - Evolution of the “Neutral”: Diverse Forms of Wide-Compatibility Haplotypes at the Locus for Reproductive Isolation.
Yohei Koide
Molecular plant
DOI: 10.1016/j.molp.2020.02.014 - Diploid Male Gametes Circumvent Hybrid Sterility Between Asian and African Rice Species.
Kuniyoshi D, Masuda I, Kanaoka Y, Shimazaki-Kishi Y, Okamoto Y, Yasui H, Yamamoto T, Nagaki K, Hoshino Y, Koide Y, Takamure I, Kishima Y.
Front Plant Sci. 2020 Nov 5;11:579305.
2019年度
- Shaping of a three-dimensional carnivorous trap through modulation of a planar growth mechanism.
Lee KJI, Bushell C, Koide Y, Fozard JA, Piao C, Yu M, Newman J, Whitewoods C, Avondo J, Kennaway R, Marée AFM, Cui M, Coen E
PLoS biology 17 e3000427
DOI: 10.1371/journal.pbio.3000427 - Genetic Properties Responsible for the Transgressive Segregation of Days to Heading in Rice.
Koide Y, Sakaguchi S, Uchiyama T, Ota Y, Tezuka A, Nagano AJ, Ishiguro S, Takamure I, Kishima Y
G3
DOI: 10.1534/g3.119.201011 - Profiling SNP and Nucleotide Diversity to Characterize Mekong Delta Rice Landraces in Southeast Asian Populations
Nguyen Thanh Tam, Maria Stefanie Dwiyanti, Yohei Koide, Atsushi J. Nagano, Ky Huynh, Huynh Quang Tin, Nguyen Loc Hien, Le Viet Dung, Yuji Kishima
PLANT GENOME 12
DOI: 10.3835/plantgenome2019.06.0042 - Responses of earliness and lateness genes for heading to different photoperiods, and specific response of a gene or a pair of genes to short day length in rice
Birendra Bahadur Rana, Misa Kamimukai, Mukunda Bhattarai, Yohei Koide, Masayuki Murai
Hereditas 156
DOI: 10.1186/s41065-019-0109-5
2018年度
- Lineage-specific gene acquisition or loss is involved in interspecific hybrid sterility in rice
Yohei Koide, Atsushi Ogino, Takanori Yoshikawa, Yuki Kitashima, Nozomi Saito, Yoshitaka Kanaoka, Kazumitsu Onishi, Yoshihiro Yoshitake, Takuji Tsukiyama, Hiroki Saito, Masayoshi Teraishi, Yoshiyuki Yamagata, Aiko Uemura, Hiroki Takagi, Yoriko Hayashi, Tomoko Abe, Yoshimichi Fukuta, Yutaka Okumoto, Akira Kanazawa
Proceedings of the National Academy of Sciences of the United States of America 115:E1995-E1962
DOI: 10.1073/pnas.1711656115 - Identification of QTLs for agronomic characteristics in an upland New Rice for Africa (NERICA) variety
Yohei Koide, Mitsuhiro Obara, Seiji Yanagihara, Yoshimichi Fukuta
Japan Agricultural Research Quarterly 52:29-37
DOI: 10.6090/jarq.52.29 - Anther culture in rice proportionally rescues microspores according to gametophytic gene effect and enhances genetic study of hybrid sterility.
Kanaoka Y, Kuniyoshi D, Inada E, Koide Y, Okamoto Y, Yasui H, Kishima Y
Plant methods 14:102
DOI: 10.1186/s13007-018-0370-z - Genetic dissection of agronomic traits in introgression lines and improvement of an elite indica rice variety
Daisuke Fujita, Yohei Koide, Nobuya Kobayashi
Japan Agricultural Research Quarterly 52:91-103
DOI: 10.6090/jarq.52.91
2017年度
- Fine mapping of a quantitative trait locus for spikelet number per panicle in a new plant type rice and evaluation of a near-isogenic line for grain productivity
Kazuhiro Sasaki, Daisuke Fujita, Yohei Koide, Patrick D. Lumanglas, Ritchel B. Gannaban, Analiza G. Tagle, Mitsuhiro Obara, Yoshimichi Fukuta, Nobuya Kobayashi, Tsutomu Ishimaru
JOURNAL OF EXPERIMENTAL BOTANY 68:2693-2702
DOI: 10.1093/jxb/erx128 - Detection of novel QTLs qDTH4.5 and qDTH6.3, which confer late heading under short-day conditions, by SSR marker-based and QTL-seq analysis
Eri Ogiso-Tanaka, Tsuyoshi Tanaka, Keisuke Tanaka, Yasunori Nonoue, Takuji Sasaki, Erina Fushimi, Yohei Koide, Yutaka Okumoto, Masahiro Yano, Hiroki Saito
Breeding Science
DOI: 10.1270/jsbbs.16096 - Genetic variation in blast resistance in rice germplasm from West Africa
Theophile Odjo, Yohei Koide, Drissa Silue, Seiji Yanagihara, Takashi Kumashiro, Yoshimichi Fukuta
Breeding Science 67:500-508
DOI: 10.1270/jsbbs.17051
2015年度
- Identification of QTLs and candidate genes for days to heading in an upland New Rice for Africa (NERICA) variety
Yohei Koide, Akiko Kawasaki-Tanaka, Theophile Odjo, Mitsuhiro Obara, Seiji Yanagihara, Yoshimichi Fukuta
EUPHYTICA 203:153-164
DOI: 10.1007/s10681-014-1289-8 - Evaluation of genetic variation among wild rice populations in Cambodia
Chhourn Orn, Rieko Shishido, Masahiro Akimoto, Ryo Ishikawa, Than Myint Htun, Ken-Ichi Nonomura, Yohei Koide, Men Sarom, Seng Vang, Sakhan Sophany, Ouk Makara, Takashige Ishii
BREEDING SCIENCE 65:430-437
DOI: 10.1270/jsbbs.65.430
2014年度
- Pathogenicity of Rice Blast (Pyricularia oryzae Cavara) Isolates from Cambodia
Yoshimichi Fukuta, Ikumi Koga, Tochi Ung, Khay Sathya, Akiko Kawasaki-Tanaka, Yohei Koide, Nobuya Kobayashi, Mitsuhiro Obara, Hun Yadana, Nagao Hayashi
JARQ-JAPAN AGRICULTURAL RESEARCH QUARTERLY 48:155-166
DOI: 10.6090/jarq.48.155
2013年度
- NAL1 allele from a rice landrace greatly increases yield in modern indica cultivars
Daisuke Fujita, Kurniawan Rudi Trijatmiko, Analiza Grubanzo Tagle, Maria Veronica Sapasap, Yohei Koide, Kazuhiro Sasaki, Nikolaos Tsakirpaloglou, Ritchel Bueno Gannaban, Takeshi Nishimura, Seiji Yanagihara, Yoshimichi Fukuta, Tomokazu Koshiba, Inez Hortense Slamet-Loedin, Tsutomu Ishimaru, Nobuya Kobayashi
Proceedings of the National Academy of Sciences of the United States of America 110:20431-20436
DOI: 10.1073/pnas.1310790110 - Detection of novel blast resistance genes, Pi58(t) and Pi59(t), in a Myanmar rice landrace based on a standard differential system
Yohei Koide, Mary Jeanie Telebanco-Yanoria, Yoshimichi Fukuta, Nobuya Kobayashi
MOLECULAR BREEDING 32:241-252
DOI: 10.1007/s11032-013-9865-5 - QTL for spikelet number from a high-yielding rice variety, Hoshiaoba, detected in an introgression line with the genetic background of an indica rice variety, IR64
Yohei Koide, Daisuke Fujita, Analiza G. Tagle, Kazuhiro Sasaki, Tsutomu Ishimaru, Yoshimichi Fukuta, Nobuya Kobayashi
EUPHYTICA 192:97-106
DOI: 10.1007/s10681-013-0882-6 - QTLs for phosphorus deficiency tolerance detected in upland NERICA varieties
Yohei Koide, Juan Pariasca Tanaka, Terry Rose, Ayumi Fukuo, Kunihiko Konisho, Seiji Yanagihara, Yoshimichi Fukuta, Matthias Wissuwa
PLANT BREEDING 132:259-265
DOI: 10.1111/pbr.12052
2012年度
- Near isogenic lines of rice for blast resistance genes as differential varieties
KOBAYASHI Nobuya, TELEBANCO‐YANORIA Mary Jeanie, FUKUTA Yoshimichi, KOIDE Yohei, KATO Hiroshi, IMBE Tokio
Annu Rep Jpn Int Res Cent Agric Sci 2010:20-21 - Complex genetic nature of sex-independent transmission ratio distortion in Asian rice species: the involvement of unlinked modifiers and sex-specific mechanisms
Yohei Koide, Y. Shinya, M. Ikenaga, N. Sawamura, K. Matsubara, K. Onishi, A. Kanazawa, Y. Sano
HEREDITY 108:242-247
DOI: 10.1038/hdy.2011.64
2011年度
- Fine mapping and identification of tightly linked DNA markers of blast resistance gene Pia by using an introgression line
Yohei Koide, Mary Jeanie Telebanco-Yanoria, Daisuke Fujita, Analiza G. Tagle, Yoshimichi Fukuta, Nobuya Kobayashi
MOLECULAR BREEDING 28:359-366 10.1007/s11032-010-9488-z - A set of near-isogenic lines for blast resistance genes with an Indica-type rainfed lowland elite rice (Oryza sativa L.) genetic background
Yohei Koide, Leodegario A. Ebron, Hiroshi Kato, Hiroshi Tsunematsu, Mary Jeanie Telebanco-Yanoria, Nobuya Kobayashi, Masao Yokoo, Sachio Maruyama, Tokio Imbe, Yoshimichi Fukuta
FIELD CROPS RESEARCH 123:19-27
DOI: 10.1016/j.fcr.2011.04.005 - A set of near-isogenic lines of Indica-type rice variety CO 39 as differential varieties for blast resistance
Mary Jeanie Telebanco-Yanoria, Yohei Koide, Yoshimichi Fukuta, Tokio Imbe, Hiroshi Tsunematsu, Hiroshi Kato, Leodegario A. Ebron, Thi Minh Nguyet Nguyen, Nobuya Kobayashi
MOLECULAR BREEDING 27:357-373
DOI: 10.1007/s11032-010-9437-x - Characterization of Rice Blast Isolates by the Differential System and their Application for Mapping a Resistance Gene, Pi19(t)
Yohei Koide, Mary Jeanie Telebanco-Yanoria, Fe Dela Pena, Yoshimichi Fukuta, Nobuya Kobayashi
JOURNAL OF PHYTOPATHOLOGY 159:85-93
DOI: 10.1111/j.1439-0434.2010.01721.x
2010年度
- Development of pyramided lines with two resistance genes, Pish and Pib, for blast disease (Magnaporthe oryzae B. Couch) in rice (Oryza sativa L.)
Yohei Koide, A. Kawasaki, M. J. Telebanco-Yanoria, A. Hairmansis, N. T. M. Nguyet, J. Bigirimana, D. Fujita, N. Kobayashi, Y. Fukuta
PLANT BREEDING 129:670-675
DOI: 10.1111/j.1439-0523.2010.01781.x - Development of near-isogenic lines of Japonica-type rice variety Lijiangxintuanheigu as differentials for blast resistance
Mary Jeanie Telebanco-Yanoria, Yohei Koide, Yoshimichi Fukuta, Tokio Imbe, Hiroshi Kato, Hiroshi Tsunematsu, Nobuya Kobayashi
BREEDING SCIENCE 60:629-638
DOI: 10.1270/jsbbs.60.629 - Varying patterns of blast (Magnaporthe grisea (Hebert) Barr.) resistance in rice (Oryza sativa L.) varieties in water-saving production system
Yohei Koide, M. J. Telebanco-Yanoria, Y. Fukuta, N. Kobayashi
International Rice Research Notes, 35
2009年度
- Resistance Genes and Selection DNA Markers for Blast Disease in Rice (Oryza sativa L.)
Yohei Koide, Nobuya Kobayashi, Donghe Xu,Yoshimichi Fukuta
JARQ-JAPAN AGRICULTURAL RESEARCH QUARTERLY 43:255-280
DOI: 10.6090/jarq.43.255 - Blast resistance genes and their selection markers in rice (Oryza sativa L.)
KOIDE Yohei, KOBAYASHI Nobuya, XU Donghe, FUKUTA Yoshimichi
JIRCAS Working Rep 95-122
2008年度
- Two loosely linked genes controlling the female specificity for cross-incompatibility in rice
Yohei Koide, Mitsunobu Ikenaga, Yuhei Shinya, Kazuki Matsubara, Yoshio Sano
EUPHYTICA 164:753-760
DOI: 10.1007/s10681-008-9707-4 - The evolution of sex-independent transmission ratio distortion involving multiple allelic interactions at a single locus in rice
Yohei Koide, Mitsunobu Ikenaga, Noriko Sawamura, Daisuke Nishimoto, Kazuki Matsubara, Kazumitsu Onishi, Akira Kanazawa, Yoshio Sano
GENETICS 180:409-420
DOI: 10.1534/genetics.108.090126 - Genetics of speciation in rice
Yohei Koide, Kazumitsu Onishi, Akira Kanazawa, Yoshio Sano
Biotechnology in Agriculture and Forestry 62:247-259
DOI: 10.1007/978-3-540-74250-0_19 - Sex-independent transmission ratio distortion system responsible for reproductive barriers between Asian and African rice species
Yohei Koide, Kazumitsu Onishi, Daisuke Nishimoto, Akhil Ranjan Baruah, Akira Kanazawa, Yoshio Sano
NEW PHYTOLOGIST 179:888-900
DOI: 10.1111/j.1469-8137.2008.02490.x